Publications

2009

Peer Reviewed Articles

Animal models for elucidating human disease: Confronting cancer and other chronic diseases

Kuzmuk, K.N. and L.B. Schook

In CAB Reviews: Perspectives in Agriculture, Veterinary Science, Nutrition and Natural Resources (pp. 1-9). Wallingford, Oxfordshire, UK: CABI Publishing

An integrated RH map of porcine chromosome 10 (SSC10)

Ma, J.G., H. Yasue, K. Eyer, H. Hiraiwa, T. Shimogiri, S.N. Meyers, J.E. Beever, L.B. Schook, C.W. Beattie, and W.S. Liu

BMC Genomics, 10, 211

Age and diet related changes in gene expression in canine skeletal muscle

Middelbos, I.S., L.K. Karr-Lilienthal, B.M. Vester, L.B. Schook, and K.S. Swanson

PLoS ONE 4(2), e4481

Design of a high density SNP genotyping assay in the pig using SNPs identified and characterized by next generation sequencing technology

Ramos, A.M., R.P.M.A Crooijmans, N.A. Affara, A.J.Amaral, A.L. Archibald, J.E.Beever, C. Bendixen, C.Churcher, R.Clark, P.Dehais, M.S. Hansen, J. Hedegaard, Z.L.Hu, H.H. Kerstens, A.S. Law, H.J. Megens, D. Milan, D.J.Nonneman, G.A. Rohrer, M.F. Rothschild, T.P.L. Smith, R.D. Schnabel, C.P. Van Tassell, J.F. Taylor, R.T. Wiedmann, L.B. Schook, and M.A.M. Groenen

PLoS ONE, 4(8), e6524

Adipose tissue gene expression profiles of healthy young adult and geriatric dogs

Swanson, K.S., K.R. Belsito, B.M. Vester, and L.B.Schook

Arch. Anim. Nutr. 63, 160-171

Nomenclature for factors of the SLA system, update 2008

Ho, C.S., J.K. Lunney, A. Ando, C. Rogel-Gaillard, J.H. Lee, L.B. Schook, and D.M. Smith

Tissue Antigens, 73(4), 307-315

Implications of age and diet on canine cerebral cortex transcription

Swanson, K.S., B.M. Vester, C.J. Apanavicius, N.A. Kirby, and L.B. Schook

Neurobiol. Aging, 30(8), 1314-1326

Diversification of porcine MHC class II genes: Evidence for selective advantage

Luetkemeier, E.S., R.S. Malhi, J.E. Beever and L.B. Schook.

Immunogenetics, 61, 119-129

The genome sequence of taurine cattle: A window to ruminant biology and evolution

The Bovine Genome Sequencing and Analysis Consortium

Science, 324, 522-528

Abstracts

Characterization of porcine betaine homocysteine methyltransferase (BHMT) and betaine homocysteine methyltransferase-2 (BHMT-2) genes

R.S. Ganu, T.A. Garrow, M. Sodhi, L.B. Schook

Experimental Biology Annual Meeting, April 18-22, 2009, New Orleans, LA

Design of the Illumina porcine 50K+ SNP Iselect™ beadchip and characterization of the porcine HapMap population

M.A.M. Groenen, R.P.M.A. Crooijmans, A.M. Ramos, A.J. Amaral, H. Kerstens, C. Bendixen, J. Hedegaard, G. Rohrer, T. Smith, C. Van Tassel, J.F. Taylor, M. Rothschild, H. Zhiliang, D. Nonneman, J. Beever, A. Archibald, A. Law, D. Milan, M. Hansen, L. Schook

Plant and Animal Genome XVII Conference, January 10-14, 2009, San Diego, CA

2008

Peer Reviewed Articles

Piggy-BACing the human genome I: Constructing a porcine BAC physical map through comparative genomics

Rogatcheva, M.B., K. Chen, D.M. Larkin, S.N. Meyers, B.M. Marron, W. He, W., L.B. Schook, and J.E. Beever

Anim. Biotechnol. 19, 28-42

DNA-based animal models of human disease: From genotype to phenotype

L.B. Schook, K. Kuzmuk, S. Adam, L. Rund, K. Chen, M. Rogatcheva, M. Mazur, C. Pollock, C. Counter

In M.H. Pinard, C. Gay, P.P. Pastoret, B. Dodet (Eds.), Animal Genomics for Animal Health (pp. 15-25), Basel, Switzerland: Karger AG

High-resolution comprehensive radiation hybrid maps of the porcine chromosomes 2p and 9p compared with the human chromosome 11

Liu, W.S., H. Yasue, K. Eyer, H. Hiraiwa, T. Shimogiri, B. Roelofs, E. Landrito, J. Ekstrand, M. Treat, N. Paes, M. Lemos, A.C. Griffith, M.L. Davis, S.N. Meyers, M. Yerle, D. Milan, J.E. Beever, L.B. Schook, and C.W. Beattie

Cytogenet. Genome Res. 120, 157-163

Abstracts

Directed differentiation of porcine mesenchymal stem cells in three dimensional matrices

L.R. Trump, J. Scrimgeour, T.S. Tanaka, G. Timp, L.B. Schook

6th Annual International Society for Stem Cell Research Annual Meeting, June 11-14, 2008, Philadelphia, PA

Towards a genomic platform for analysis of wild boar and suiforme diversity and evolution

R. Crooijmans, T. Baxter, S. Casu, K. Chen, A. Ducos, S. Genini, E Guiffra, U.T. Ju, H.P. Koelewijn, M. Longeri, E. Luetkemeier, R. Malhi, H.J. Megens, W. Muir, N. Okumura, M. Perez-Encisco, A. Roca, C. Roseman, G. Semaidi, M. Sodhi, G. Larson, M Groenen, L. Schook

7th International Symposium on Wild Boar (Sus Scrofa) and Sub-Order Suiformes, August 29, 2008, Sopron, Hungary

Large animal models for human diseases

L.B. Schook

Proceedings of the 31st International Conference on Animal Genetics, July 20-24, 2008, Amsterdam, The Netherlands

2007

Peer Reviewed Articles

BoLA class I allele diversity and polymorphism in a herd of cattle

Babiuk, S., B. Horseman, C. Zhang, M. Bickis, A. Kusalik, L.B. Schook, M.S. Abrahamsen, and R. Pontarollo

Immunogenetics, 59, 167-176

Genetic induction of tumorigenesis in swine

Adam, S.J., L.A. Rund, K.N. Kuzmuk, J.F. Zachary, L.B. Schook, and C.M. Counter

Oncogene, 26, 1038-1045

Characterization of the porcine ATM gene: Towards the generation of a novel none-murine animal model for Ataxia-Telangiectasia

Rogatcheva, M.B., K.L. Fritz, L.A. Rund, C.B. Pollock, J.E. Beever, C.M. Counter, and L.B. Schook

Gene, 405, 27-35

A high utility integrated map of the pig genome

Humphray, S.J., C.E. Scott, R. Clark, B. Marron, C. Bender, N. Camm, J. Davis, A. Jenks, A. Noon, M. Patel, H. Sehra, F. Yang, M.B. Rogatcheva, D. Milan, P. Chardon, G. Rohrer, D. Nooneman, P. de Jong, S.N. Meyers, A. Archibald, J.E. Beever, L.B. Schook, and J. Rogers

Genome Biol. 8(7), R139

Transcriptome profiling of the small intestinal epithelium in germfree versus conventional piglets

Chowdhury, S.R., D.E. King, B.P. Willing, M.R. Band, J.E. Beever, A.B. Lane, J.J. Loor, J.C. Marini, L.A. Rund, L.B. Schook, A.G. Kessel, and H.R. Gaskins

BMC Genomics, 8, 215

Genetic resources, genome mapping and evolutionary genomics of the pig (Sus scrofa)

Chen, K., T. Baxter, W.M. Muir, M.A. Groenen, and L.B. Schook

Int. J. Biol. Sci. 3, 153-165

Comparative genomics of xenobiotic metabolism: A porcine-human PXR gene comparison

Pollock, C.B., M.B. Rogatcheva, L.B. Schook

Mamm. Genomics, 18, 210-219

Genética y perspectivas emergentes en la selección de cerdos para resistencia a enfermedades

Luetkemeier, E.S., F.A. Zuckermann, L.B. Schook

Suis Genetica, 42, 14-22

The porcine genome initiative: Implications for digestive physiology

L.B. Schook

Livest. Sci. 108, 6-12

Abstracts

A three-dimensional culture system for directed differentiation of porcine mesenchymal stem cells

L.R. Trump, U. Mirsaidov, G. Timp, L.B. Schook

5th Annual International Society for Stem Cell Research Annual Meeting, June 17-20, 2007, Cairns, Australia

Porcine MHC class II haplotype divergence

E. Luetkemeier, L.B. Schook

American Association of Immunologists Annual Meeting, May 18-22, 2007, Miami Beach, FL

2006

Peer Reviewed Articles

Characterization of swine leukocyte antigen polymorphism by sequence-based and PCR-SSP methods in Meishan pigs

Ho, C.S., E.S. Rochelle, G.W. Martens, L.B. Schook, and D.M. Smith

Immunogenetics, 11, 873-882

Canine nutritional model: Influence of age, diet, and genetics on health and well-being

Swanson, K.S. and L.B. Schook

Curr. Nutr. Food Sci. 2, 115-126

USDA's $10M primes swine genome consortium for year of the pig

Genome Technology, March 2006

Isolation and molecular characterization of the porcine transforming growth factor beta type I receptor (TGFBRI) gene

Chen, K., L.A. Rund, J.E. Beever, and L.B. Schook

Gene, 384, 62-72

Abstracts

A porcine model of T-cell lymphoma

K.N. Kuzmuk, L.A. Rund, S.J. Adam, J.F. Zachary, C.M. Counter, L.B. Schook

30th International Conference on Animal Genetics, August 20-25, 2006, Porto Seguro, Brazil

DNA typing of swine class II major histocompatibility complex polymorphisms

E.S. Rochelle and L.B. Schook

2nd European Veterinary Immunology Workshop, September 4-6, 2006, Paris, France

Targeted SNP haplotype analysis of porcine ovulation rate QTL on SSC8

K. Chen, J. Beever, L.A. Rund, L.B. Schook

Plant and Animal Genome XIV Conference, January 9-13, 2006, San Diego, CA

Towards a high resolution porcine RH map for sequence assembly

W.S. Liu, A. Rink, K. Eyer, H. Yasue, B. Roelofs, H. Hiraiwa, T. Shimogiri, S.N. Meyers, E. Landrito, J. Ekstrand, M. Treat, M. Yerle, D. Milan, J.E. Beever, L.B. Schook, C.W. Beattie

Plant and Animal Genome XIV Conference, January 9-13, 2006, San Diego, CA

A comparative radiation hybrid map of porcine X chromosome

E.K. Wagner, S.N. Meyers, M.B. Rogatcheva, D. Milan, L.B. Schook, J.E. Beever

Plant and Animal Genome XIV Conference, January 9-13, 2006, San Diego, CA

Ataxia-telangiectasia: Developing a porcine model

M. Rogatcheva, L. Rund, C. Pollock, J. Beever, C. Counter, L. Schook

Plant and Animal Genome XIV Conference, January 9-13, 2006, San Diego, CA

A porcine model of tumorigenesis

S.J. Adam, L.A. Rund, K.N. Kuzmuk, L.B. Schook, C.M. Counter

30th International Conference on Animal Genetics, August 20-25, 2006, Porto Seguro, Brazil

A novel porcine model of atherosclerosis

M.J. Mazur, J.F. Zachary, J.E. Pettigrew, L.B. Schook

Experimental Biology Annual Meeting, April 1-5, 2006, San Francisco, CA

High-resolution comprehensive radiation hybrid maps of the porcine chromosome 2p and 9p compared with human chromosome 11

W.S. Liu, H. Yasue, K. Eyer, H. Hiraiwa, T. Shimogiri, B. Roelofs, E. Landrito, J. Eskstrand, M. Treat, N. Paes, M. Lemos, A. Grittith, S.N. Meyers, M. Yerle, D. Milan, J.E. Beever, L.B. Schook, A. Rink, C.W. Beattie

30th International Conference on Animal Genetics, August 20-25, 2006, Porto Seguro, Brazil

SNP haplotype map defining growth QTL on SSC1

L.B. Schook, J.E. Beever, L.A. Rund, K. Chen

Plant and Animal Genome XIV Conference, January 9-13, 2006, San Diego, CA

An integrated RH map of the porcine genome with more than 5,000 anchoring points on the human genome provides a framework for the sequencing of the pig

D. Milan, J.E. Beever, Y. Lahbib, L. Schook, C. Beattie, M. Yerle

30th International Conference on Animal Genetics, August 20-25, 2006, Porto Seguro, Brazil

Comparative genomics of drug metabolism: Porcine-human PXR gene comparison

C.P. Pollock, L.B. Schook, M.B. Rogatcheva

Plant and Animal Genome XIV Conference, January 9-13, 2006, San Diego, CA

High throughput isolation and directed differentiation of mesenchymal stem cells

L.R. Trump, G. Durack, U. Mirsaidov, G. Timp, L.B. Schook

Proceedings of the 4th International Society for Stem Cell Research Annual Meeting (pp. 301), June 29 – July 1, 2006, Toronto, Canada

A genetically defined porcine model of tumorigenesis

K.N. Kuzmuk, L.A. Rund, S.J. Adam, J.F. Zachary, C.M. Counter, L.B. Schook

Experimental Biology Annual Meeting, April 1-5, 2006, San Francisco, CA

Host-microbe interactions: Addressing genetic and environmental interactions utilizing cloned pigs

E.S. Rochelle, R. Husmann, G. Calzada-Nova, F.A. Zuckermann, L.B. Schook

Plant and Animal Genome XIV Conference, January 9-13, 2006, San Diego, CA

Posters

2009

Characterization of porcine betaine homocysteine methyltransferase (BHMT) and betaine homocysteine methyltransferase-2 (BHMT2) genes

R.S. Ganu, T. A. Garrow, M. Sodhi, L. B. Schook

Experimental Biology Annual Meeting, April 18-22, 2009, New Orleans, LA

2008

Directed differentiation of porcine mesenchymal stem cells in three dimensional matrices

L.R. Trump, J. Scrimgeour, T.S. Tanaka, G. Timp, and L.B. Schook

6th Annual International Society for Stem Cell Research Annual Meeting, June 11-14, 2008, Philadelphia, PA

2007

A three-dimensional culture system for directed differentiation of porcine mesenchymal stem cells

L.R. Trump, U. Mirsaidov, G. Timp, L.B. Schook

5th Annual International Society for Stem Cell Research Annual Meeting, June 17-20, 2007, Cairns, Australia